| Class | Description |
|---|---|
| ClassifierTraineeMaker |
A command line class to create training information from the raw data.
|
| CopyNumberParser | |
| LineageSequence |
A ParsedRawSequence holds the data for a raw sequence.
|
| LineageSequenceParser |
A parser to parse a reader containing the raw sequences.
|
| RawGenusWordConditionalProb |
A RawGenusWordConditionalProb contains the index of the genus node and
the conditional probability of the node contains the word.
|
| RawHierarchyTree |
A RawHierarchyTree holds the raw taxon and sequences information.
|
| Taxonomy |
A Taxonomy holds the raw taxon information.
|
| TreeFactory |
A TreeFactory reads the raw taxonomic information and creates the RawHierarchyTree nodes.
|
| Exception | Description |
|---|---|
| NameRankDupException |