| Class | Description |
|---|---|
| ClassificationResult |
This class holds the classification results for a query sequence.
|
| Classifier |
This is the class to do the classification.
|
| ClassifierCmd |
This is the legacy command line class to do the classification.
|
| GenusWordConditionalProb |
A GenusWordConditionalProb holds the index of the genus node,
and the conditional probability that genus node contains the word.
|
| HierarchyTree |
A HierarchyTree holds the taxonomic information of a taxon.
|
| RankAssignment |
A RankAssignment holds the classification result of a sequence at one rank level.
|
| TrainingInfo |
The TrainingInfo holds all the training information and taxonomy hierarchy information.
|
| Exception | Description |
|---|---|
| ShortSequenceException |
Handles exception for a short sequence.
|
| TrainingDataException |
Handles the exception occurred when parsing training information.
|